Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015828754.1_cds_XP_016503501.1_17041
CDS Infomation

[gene=LOC107821582] [db_xref=GeneID:107821582] [protein=cellulose synthase-like protein D1] [protein_id=XP_016503501.1] [location=complement(join(28050..28998,29239..29635,29738..30113,30573..30941,31412..31841,32378..32979))] [gbkey=CDS]
Sequence

ATGGCGACTTCTTCGAATCCAAGAAAAGTAGATTCCTCGAACCGACCACCTCAGGCGGTC
AAATTCTCACGACGCACGTCCAGTGGACGCGTCGTGAGCTTATCCCGGGACGATGATCTA
GACGTCCCAGGCGATAGTCAAAATGATTTTATCAACTATACAGTAATGATGCCACCAACC
CCGGATAATCAACCAGGGGCTGATGCAAATGGTGACAAGCCAGATGGTTCTGGACCATAT
GGCTCGTCTAGATTCAGGACCGAGTCCCAAAGGCGAATGGGTAGTCGTGGAGGTGAAGAT
GATGATGGTGGTTTTGGTGGTGGTGCGCGCGGTGGAAATGCATCGGGTTTGGATCGTAGG
ATGTCTGTACTAAAATCGAATAATAAATCAATGTTACTAAGGAGCCAGACTCAAGATTTT
GATCATAATCGTTGGCTTTTCGAAACTAAAGGAAAATATGGTATTGGAAATGCTTTTTGG
CAACAAGATGAAGGATCATATGATCATGATACTGGAATGAGTATGTCTGATTTTATGGAC
AAACCATGGAAACCACTTACAAGAAAAAGCAAAGTCCCTCCTGAGATCATTAGCCCCTAC
AGATTACTTATTGTTATCCGGCTAGTGGCATTAATTTGTTTTTTGACATGGCGAGTCCAA
AATCCAAATTATGATGCAATGTGGCTATGGGGAATGTCAATAGCATGTGAACTATGGTTT
GCATTTTCATGGCTTCTTGATATTCTTCCAAAATTTAACCCCATTAATAGATCTGCTGAT
TTAGCTGCCCTTAAAGAAAAATTCGAAAGCCCGTCGCCTTCGAATCCTCATGGTAGATCA
GATTTACCAGGAGTTGATGTGTTTATTTCTACAGCTGATCCTGATAAAGAACCTCCTCTT
GTTACTGCTAATACTATACTTTCAGTTCTTGCTGTTGAATATCCTATTGAGAAACTATCT
CTTTATATTTCTGATGATGGTGGTGCTATTCTTACTTTTGAAGCTATGGCTGAGGCTGTC
AACTTTGCTCAGGTTTGGGTGCCATTTTGTCGAAAACATAACATTGAGCCAAGAAATCCA
GACAGTTACTTCAATCAAAAGACAGATCCAACGAAAAACAAGAAGCGTCCTGATTTTGTG
AAGGATCGACGTTGGATCAAGAGGGAATACGACGAGTTCAAGGTCAGGATCAACGGTTTA
CCAGAAGTTATACGCAAAAGATGCGAGATGTATAACTCAAAAGAAGAAATGAAGGAAAAG
GAACTAGCAAAGGAGAATAATGGAGGGGAAGATGTTAAAGCTCAAAAGGCAACTTGGATG
GCTGATGGCACACATTGGCCTGGCACTTGGTTTAGTCCTATTGCTGATCACTCTAAAGGA
GATCATGCCGGAATTTTGCAAATAATGAGCAAGGTGCCGGAAAATGATCCAATAATGGGA
GGTCCAAATGAAAAGCAATTAGACTTCACCGGTATTGACATCCGAATTCCCATGTTTGCG
TATGTGTCTCGTGAGAAACGGCCAGGTTATGATCATAACAAGAAAGCAGGAGCAATGAAC
GCCTTGGTTAGAGCTTCTGCAATTCTTTCAAATGGACCATTTATACTCAACTTGGATTGT
GATCATTACGTCTATTACTCCATGGCCATTCAAGAGGGTATGTGTTACATGATGGATCGT
GGTGGTGATCGTATTTGCTACCTACAATTCCCTCAAAGATTTGAAGGAATTGATCCCTCT
GATCGATATGCTAACCATAACACTGTGTTTTTTGATGGAAATATGCGAGCTTTGGATGGT
CTACAAGGTCCTGTATACGTTGGGACTGGATGTATGTTCAGGCGCTATGCACTCTATGGT
TTCCACCCGCCACGAGCTAATGAGTACACGGGCTTCCTTGGGAAAAACAAGAAAGAAGCG
AAAAATATTACAATGCCATCAGACTTAGATGATGATTCACAACCTTTAACAGGACATCCT
GACTTGAACTTGCCAAAGCAATTTGGAAATTCGACGATGTTTGTTGAGTCAATAGCAGTA
GCTGAATTTCAAGGACGGCCTCTAGCCGATCACATCACTGTTAAAAATGGCCGGCCACCT
GGCGCCTTACTCATTCCGCGTCCTCCACTAGATGCACCAACTGTAGCTGAGGCTATTGCA
GTCATCTCTTGCTGGTTTGAGGACAAAACAGAATGGGGAGATAGAATAGGATGGATTTAT
GGATCAGTGACAGAAGATGTGGTCACAGGATACAGAATGCACAATCGTGGATGGCGATCT
GTCTACTGTATTACAAAACGAGATGCTTTTCGTGGCACTGCACCTATCAACTTGACAGAT
CGTTTGCACCAGGTGCTTCGTTGGGCAACTGGTTCAGTCGAGATTTTCTACTCTCGCAAC
AATCCAGCTCTAGCCAGCCCGCGTCTTAAGTTCTTACAACGCATTGCATACTTCAATGTT
GGTGTCTACCCTTTCACCTCAATCTTCCTTGTTGTCTACTGTTTCATTCCAGCACTTTGC
CTCTTCAGCGGACAATTCATCGTATCGAATTTAAGCATACCGTTTCTTTCCTATCTCTTG
CTCATTACTATCACTCTTGTTCTCATATCACTTCTTGAAGTCAAATGGTCTGGTATAGCC
CTTGAGGAACTATGGCGAAACGAGCAGTTTTGGCTCATCGGTGGCACGAGTGCTCACTTT
GCTGCTGTAATTCAGGGACTTTTAAAGGTGGTAGCAGGCGTTGAGATCTCGTTTACATTG
ACATCGAAATCTGCTGGTGATGAGGATGAAGACATATATGCTGATTTACATGTAGTGAAA
TGGACAAGTTTATTTATACTTCCATTGACAATATTGGTGGTGAATTTAACTGCAATTGTT
ATTGGTATTGCAAGGACAGTATACAGTGTGATACCACAATGGAATAGGCTATTTGGTGGT
GCATTTTTCAGCTTTTGGGTGTTGTCACATTTATATCCATTTGCTAAAGGATTAATGGGA
AGAAGAGGAAGAGTGCCAACAATTGTATACATATGGACAGGGCTTATTGCTATTACTGTT
TCCTTACTTTGGTTATCTATTTCTCAAGGTAATAATACTGATGGAGGAAACTTTAAGATA
TAG

Peptide Sequence

PEP ID

XP_016503501.1
PEP Infomation

PREDICTED: cellulose synthase-like protein D1 [Nicotiana tabacum]
Sequence

MATSSNPRKVDSSNRPPQAVKFSRRTSSGRVVSLSRDDDLDVPGDSQNDFINYTVMMPPT
PDNQPGADANGDKPDGSGPYGSSRFRTESQRRMGSRGGEDDDGGFGGGARGGNASGLDRR
MSVLKSNNKSMLLRSQTQDFDHNRWLFETKGKYGIGNAFWQQDEGSYDHDTGMSMSDFMD
KPWKPLTRKSKVPPEIISPYRLLIVIRLVALICFLTWRVQNPNYDAMWLWGMSIACELWF
AFSWLLDILPKFNPINRSADLAALKEKFESPSPSNPHGRSDLPGVDVFISTADPDKEPPL
VTANTILSVLAVEYPIEKLSLYISDDGGAILTFEAMAEAVNFAQVWVPFCRKHNIEPRNP
DSYFNQKTDPTKNKKRPDFVKDRRWIKREYDEFKVRINGLPEVIRKRCEMYNSKEEMKEK
ELAKENNGGEDVKAQKATWMADGTHWPGTWFSPIADHSKGDHAGILQIMSKVPENDPIMG
GPNEKQLDFTGIDIRIPMFAYVSREKRPGYDHNKKAGAMNALVRASAILSNGPFILNLDC
DHYVYYSMAIQEGMCYMMDRGGDRICYLQFPQRFEGIDPSDRYANHNTVFFDGNMRALDG
LQGPVYVGTGCMFRRYALYGFHPPRANEYTGFLGKNKKEAKNITMPSDLDDDSQPLTGHP
DLNLPKQFGNSTMFVESIAVAEFQGRPLADHITVKNGRPPGALLIPRPPLDAPTVAEAIA
VISCWFEDKTEWGDRIGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDAFRGTAPINLTD
RLHQVLRWATGSVEIFYSRNNPALASPRLKFLQRIAYFNVGVYPFTSIFLVVYCFIPALC
LFSGQFIVSNLSIPFLSYLLLITITLVLISLLEVKWSGIALEELWRNEQFWLIGGTSAHF
AAVIQGLLKVVAGVEISFTLTSKSAGDEDEDIYADLHVVKWTSLFILPLTILVVNLTAIV
IGIARTVYSVIPQWNRLFGGAFFSFWVLSHLYPFAKGLMGRRGRVPTIVYIWTGLIAITV
SLLWLSISQGNNTDGGNFKI

Transcript Sequence

Gene sequence data has not been registered.